SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11586348	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11588763	0.94[ASN][1000 genomes]
rs12058931	1.00[JPT][hapmap]
rs1218566	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1218576	1.00[ASN][1000 genomes]
rs12729486	1.00[JPT][hapmap]
rs12754189	0.94[ASN][1000 genomes]
rs13376333	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs13376345	1.00[ASN][1000 genomes]
rs34106427	0.94[ASN][1000 genomes]
rs34292822	0.94[ASN][1000 genomes]
rs34515871	0.94[ASN][1000 genomes]
rs36004974	1.00[ASN][1000 genomes]
rs61150523	1.00[ASN][1000 genomes]
rs6426985	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6426986	0.94[ASN][1000 genomes]
rs6426987	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6426988	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6658392	1.00[ASN][1000 genomes]
rs6666258	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs6666891	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6691463	0.94[ASN][1000 genomes]
rs6691945	1.00[ASN][1000 genomes]
rs6704241	1.00[ASN][1000 genomes]
rs6704449	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
KCNN3	Distal transcriptional regulation
KCNN3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
SHE	SCAN
ANP32E	SCAN