SNP Report
Name | rs12117919   dbSNP |
---|---|
Location | chr:1,113929511 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11102629 | 0.93[EUR][1000 genomes] |
rs11102646 | 0.83[EUR][1000 genomes] |
rs11578447 | 0.83[EUR][1000 genomes] |
rs12117465 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs12119281 | 0.93[EUR][1000 genomes] |
rs12125741 | 0.93[EUR][1000 genomes] |
rs12127683 | 0.93[EUR][1000 genomes] |
rs12130729 | 0.88[EUR][1000 genomes] |
rs12130763 | 0.93[EUR][1000 genomes] |
rs12131115 | 0.93[EUR][1000 genomes] |
rs12144505 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs12145834 | 0.93[EUR][1000 genomes] |
rs17448063 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs17461007 | 0.93[EUR][1000 genomes] |
rs17461231 | 0.93[EUR][1000 genomes] |
rs17507884 | 0.89[EUR][1000 genomes] |
rs1936931 | 0.93[EUR][1000 genomes] |
rs2359415 | 0.93[EUR][1000 genomes] |
rs6537788 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7533429 | 0.93[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | Proximal transcriptional regulation |
MAGI3 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014