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rVarBase
SNP Report
Basic Infomation
Name
rs12110780  
dbSNP
Location
chr:6,90896770
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10806425
0.98[ASN][1000 genomes]
rs10944480
1.00[ASN][1000 genomes]
rs12526057
0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12528427
0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16882568
0.88[ASN][1000 genomes]
rs2501718
0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34460816
0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4706359
0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4706360
1.00[ASN][1000 genomes]
rs4997561
1.00[ASN][1000 genomes]
rs60649859
0.86[EUR][1000 genomes]
rs6919587
0.83[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
BACH2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)