SNP Report

Basic Infomation

Name	rs11889769 dbSNP
Location	chr:2,65272929
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1055676	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11126025	0.90[AFR][1000 genomes]
rs11884205	1.00[AMR][1000 genomes]
rs11890755	0.81[AFR][1000 genomes]
rs11896065	1.00[AMR][1000 genomes]
rs17029820	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17029860	1.00[AMR][1000 genomes]
rs1990646	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55784483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58141624	1.00[AMR][1000 genomes]
rs58786272	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60633467	1.00[AMR][1000 genomes]
rs73934899	0.85[AFR][1000 genomes]
rs73934902	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936404	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936410	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936422	1.00[AMR][1000 genomes]
rs73936426	1.00[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)