SNP Report
Basic Infomation
| Name | rs11824028 dbSNP |
|---|---|
| Location | chr:11,61207681 |
| Allele | G/C |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11230690 | 1.00[ASN][1000 genomes] |
| rs12281296 | 1.00[ASN][1000 genomes] |
| rs12284002 | 1.00[ASN][1000 genomes] |
| rs12285794 | 1.00[ASN][1000 genomes] |
| rs17156025 | 1.00[ASN][1000 genomes] |
| rs1807359 | 1.00[ASN][1000 genomes] |
| rs28720260 | 1.00[EUR][1000 genomes] |
| rs35245221 | 1.00[EUR][1000 genomes] |
| rs3892885 | 1.00[EUR][1000 genomes] |
| rs59271124 | 1.00[ASN][1000 genomes] |
| rs6632 | 1.00[ASN][1000 genomes] |
| rs7110530 | 1.00[ASN][1000 genomes] |
| rs7925969 | 1.00[EUR][1000 genomes] |
| rs7937419 | 1.00[EUR][1000 genomes] |
| rs896830 | 1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000240823 | Proximal transcriptional regulation |
| ENSG00000256591 | Distal transcriptional regulation |
| CPSF7 | Distal transcriptional regulation |
| SDHAF2 | Distal transcriptional regulation |
| ENSG00000256591 | RNA binding protein mediated regulation |
| SDHAF2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014