SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10485497	1.00[CHB][hapmap]
rs12480063	1.00[CHB][hapmap]
rs13041282	1.00[CHB][hapmap]
rs6058480	1.00[CEU][hapmap];0.89[YRI][hapmap];0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6061015	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6061020	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6061022	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6087786	1.00[CHB][hapmap]
rs6089096	1.00[CHB][hapmap]
rs7266721	1.00[CHB][hapmap]
rs8125078	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs8125378	1.00[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
TTLL9	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)