SNP Report
Basic Infomation
| Name | rs11611327 dbSNP |
|---|---|
| Location | chr:12,48935999 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11612896 | 0.80[GIH][hapmap] |
| rs11829869 | 0.80[GIH][hapmap] |
| rs11832311 | 0.80[GIH][hapmap] |
| rs12318285 | 0.95[CEU][hapmap];0.91[TSI][hapmap];0.85[EUR][1000 genomes] |
| rs12425518 | 0.90[CHB][hapmap];0.95[CHD][hapmap];0.85[GIH][hapmap];0.80[ASN][1000 genomes] |
| rs4620769 | 0.80[GIH][hapmap] |
| rs56053566 | 0.84[EUR][1000 genomes] |
| rs7306166 | 0.81[CHB][hapmap];0.83[ASN][1000 genomes] |
| rs73302561 | 0.80[ASN][1000 genomes] |
| rs73302563 | 0.80[ASN][1000 genomes] |
| rs7966826 | 0.80[GIH][hapmap] |
| rs7974371 | 0.86[LWK][hapmap];0.90[YRI][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| OR11M1P | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 4)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014