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rVarBase
SNP Report
Basic Infomation
Name
rs11564147  
dbSNP
Location
chr:12,40739493
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11564173
1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs58911468
0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73277531
0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73277533
0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs919174
1.00[CEU][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
LRRK2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)