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rVarBase
SNP Report
Basic Infomation
Name
rs1151139  
dbSNP
Location
chr:11,61671156
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs174462
0.81[EUR][1000 genomes]
rs174469
0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs174470
0.95[AFR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs174474
0.90[ASN][1000 genomes]
rs174479
0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3815045
0.83[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
RAB3IL1
Proximal transcriptional regulation
FADS3
Distal transcriptional regulation
FTH1
Distal transcriptional regulation
ENSG00000269089
Distal transcriptional regulation
BEST1
Distal transcriptional regulation
RAB3IL1
Distal transcriptional regulation
RAB3IL1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)