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rVarBase
SNP Report
Basic Infomation
Name
rs11466688  
dbSNP
Location
chr:1,1140813
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11466687
1.00[CHD][hapmap];1.00[LWK][hapmap]
rs11466694
1.00[LWK][hapmap]
rs11804831
1.00[CHD][hapmap]
rs13306651
1.00[CHB][hapmap]
rs28488099
1.00[CHD][hapmap]
rs28555183
1.00[CHD][hapmap]
rs3818646
1.00[LWK][hapmap]
rs4970364
1.00[CHD][hapmap]
rs7548798
1.00[CHB][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000223823
Distal transcriptional regulation
TTLL10-AS1
Distal transcriptional regulation
TTLL10
Distal transcriptional regulation
SDF4
Distal transcriptional regulation
UBE2J2
Distal transcriptional regulation
TNFRSF18
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)