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rVarBase
SNP Report
Basic Infomation
Name
rs11466694  
dbSNP
Location
chr:1,1139416
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11466687
1.00[LWK][hapmap]
rs11466688
1.00[LWK][hapmap]
rs11586188
1.00[CHB][hapmap]
rs13306651
1.00[CHB][hapmap]
rs28360890
1.00[LWK][hapmap]
rs3818646
1.00[LWK][hapmap]
rs4534327
1.00[LWK][hapmap]
rs7548798
1.00[CHB][hapmap]
rSNP related genes
Symbol
Regulation type
TNFRSF18
Distal transcriptional regulation
ENSG00000223823
Distal transcriptional regulation
TTLL10-AS1
Distal transcriptional regulation
TTLL10
Distal transcriptional regulation
SDF4
Distal transcriptional regulation
TNFRSF18
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)