SNP Report
Basic Infomation
| Name | rs11465203 dbSNP |
|---|---|
| Location | chr:1,155162957 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11264350 | 1.00[MEX][hapmap] |
| rs12029944 | 1.00[MEX][hapmap] |
| rs1611772 | 1.00[MEX][hapmap] |
| rs16836586 | 1.00[AMR][1000 genomes] |
| rs2070679 | 1.00[AMR][1000 genomes] |
| rs59650797 | 1.00[AMR][1000 genomes] |
| rs6671228 | 1.00[AMR][1000 genomes] |
| rs6672663 | 1.00[AMR][1000 genomes] |
| rs6683147 | 1.00[AMR][1000 genomes] |
| rs6683706 | 1.00[AMR][1000 genomes] |
| rs6690002 | 1.00[AMR][1000 genomes] |
| rs7527209 | 1.00[AMR][1000 genomes] |
| rs7529556 | 1.00[AMR][1000 genomes] |
| rs7531890 | 1.00[AMR][1000 genomes] |
| rs7536194 | 1.00[AMR][1000 genomes] |
| rs7554397 | 1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| KRTCAP2 | Proximal transcriptional regulation |
| MUC1 | Proximal transcriptional regulation |
| MIR92B | Proximal transcriptional regulation |
| ENSG00000231064 | Proximal transcriptional regulation |
| FASTK | Distal transcriptional regulation |
| CFL1 | Distal transcriptional regulation |
| NAB2 | Distal transcriptional regulation |
| RNU5A-1 | Distal transcriptional regulation |
| HIST1H2AB | Distal transcriptional regulation |
| MCM4 | Distal transcriptional regulation |
| OTUD5 | Distal transcriptional regulation |
| EFNA3 | Distal transcriptional regulation |
| EFNA1 | Distal transcriptional regulation |
| SLC50A1 | Distal transcriptional regulation |
| ENSG00000250784 | Distal transcriptional regulation |
| GBAP1 | Distal transcriptional regulation |
| FAM189B | Distal transcriptional regulation |
| GBA | Distal transcriptional regulation |
| FDPS | Distal transcriptional regulation |
| MSTO1 | Distal transcriptional regulation |
| ENSG00000232519 | Distal transcriptional regulation |
| MSTO2P | Distal transcriptional regulation |
| ENSG00000216109 | Distal transcriptional regulation |
| C1orf43 | Distal transcriptional regulation |
| UBAP2L | Distal transcriptional regulation |
| SHC1 | Distal transcriptional regulation |
| RUSC1 | Distal transcriptional regulation |
| RUSC1-AS1 | Distal transcriptional regulation |
| SCAMP3 | Distal transcriptional regulation |
| TUBD1 | Distal transcriptional regulation |
| RPS6KB1 | Distal transcriptional regulation |
| CKS1B | Distal transcriptional regulation |
| ZBTB7B | Distal transcriptional regulation |
| ADAM15 | Distal transcriptional regulation |
| ENSG00000202027 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014