SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11824646	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17146543	0.84[EUR][1000 genomes]
rs17146569	0.97[EUR][1000 genomes]
rs17146575	0.97[EUR][1000 genomes]
rs4081424	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58717149	0.90[EUR][1000 genomes]
rs7103328	0.94[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ARL2	Proximal transcriptional regulation
GPR107	Distal transcriptional regulation
MEN1	Distal transcriptional regulation
ATG2A	Distal transcriptional regulation
PPP2R5B	Distal transcriptional regulation
C11orf85	Distal transcriptional regulation
BATF2	Distal transcriptional regulation
VPS51	Distal transcriptional regulation
ENSG00000254501	Distal transcriptional regulation
TM7SF2	Distal transcriptional regulation
ENSG00000255173	Distal transcriptional regulation
ZNHIT2	Distal transcriptional regulation
FAU	Distal transcriptional regulation
MRPL49	Distal transcriptional regulation
CDCA5	Distal transcriptional regulation
ZFPL1	Distal transcriptional regulation
SPDYC	Distal transcriptional regulation
ENSG00000229719	Distal transcriptional regulation
CAPN1	Distal transcriptional regulation
ENSG00000254614	Distal transcriptional regulation
SAC3D1	Distal transcriptional regulation
SYVN1	Distal transcriptional regulation
SNX15	Distal transcriptional regulation
NAALADL1	Distal transcriptional regulation
EHD1	Distal transcriptional regulation
LRFN4	Distal transcriptional regulation
ARL2	RNA binding protein mediated regulation
SNX15	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)