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rVarBase
SNP Report
Basic Infomation
Name
rs11230906  
dbSNP
Location
chr:11,61879689
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10897215
1.00[LWK][hapmap];0.94[MKK][hapmap];1.00[YRI][hapmap]
rs11230918
1.00[YRI][hapmap]
rs11230920
1.00[YRI][hapmap]
rs72928167
0.89[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
INCENP
Distal transcriptional regulation
MIR611
Distal transcriptional regulation
TMEM258
Distal transcriptional regulation
FEN1
Distal transcriptional regulation
FADS2
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 3)
eQTL related gene
Source
ZFP91-CNTF
SCAN
CCDC86
SCAN
SAC3D1
SCAN