SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897196	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10897208	0.89[EUR][1000 genomes]
rs11230872	0.86[EUR][1000 genomes]
rs11230873	0.89[EUR][1000 genomes]
rs11230874	0.89[EUR][1000 genomes]
rs12226075	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12421279	0.82[EUR][1000 genomes]
rs2028061	0.91[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4343027	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4534592	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4963444	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000244176	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)