SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10887710	0.95[CHB][hapmap];0.81[JPT][hapmap]
rs11202403	0.96[CHB][hapmap];0.83[JPT][hapmap]
rs11202666	1.00[CEU][hapmap];0.91[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2236568	0.92[CHB][hapmap]
rs2993763	0.95[CHB][hapmap]
rs2994388	0.95[CHB][hapmap]
rs3827869	0.83[CHB][hapmap]
rs3851059	0.83[CHB][hapmap]
rs4933327	0.83[CHB][hapmap]
rs4934027	0.83[CHB][hapmap]
rs4934028	0.95[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
MAT1A	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)