SNP Report
Basic Infomation
| Name | rs11187022 dbSNP |
|---|---|
| Location | chr:10,94255043 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10509645 | 1.00[ASN][1000 genomes] |
| rs10786048 | 0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10882067 | 0.97[ASN][1000 genomes] |
| rs10882071 | 1.00[ASN][1000 genomes] |
| rs10882072 | 0.98[ASN][1000 genomes] |
| rs10882074 | 0.98[ASN][1000 genomes] |
| rs10882083 | 0.87[ASN][1000 genomes] |
| rs11187030 | 0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11187033 | 1.00[ASN][1000 genomes] |
| rs11187072 | 0.87[ASN][1000 genomes] |
| rs11187078 | 0.83[ASN][1000 genomes] |
| rs12220493 | 0.82[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs2421943 | 0.80[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs2798253 | 0.94[ASN][1000 genomes] |
| rs7073833 | 0.81[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs7078418 | 0.85[ASN][1000 genomes] |
| rs7921210 | 0.82[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| IDE | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014