SNP Report
Basic Infomation
| Name | rs10882067 dbSNP |
|---|---|
| Location | chr:10,94244268 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 26)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1044153 | 0.80[EUR][1000 genomes] |
| rs10509645 | 0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs10786048 | 0.86[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs10882071 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs10882072 | 0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs10882074 | 0.91[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs10882083 | 0.84[ASN][1000 genomes] |
| rs10882085 | 0.80[EUR][1000 genomes] |
| rs10882092 | 0.80[EUR][1000 genomes] |
| rs10882095 | 0.80[EUR][1000 genomes] |
| rs10882096 | 0.80[EUR][1000 genomes] |
| rs11187022 | 0.97[ASN][1000 genomes] |
| rs11187030 | 0.86[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs11187033 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs11187072 | 0.84[ASN][1000 genomes] |
| rs11187078 | 0.84[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs11187090 | 0.80[EUR][1000 genomes] |
| rs11187096 | 0.80[EUR][1000 genomes] |
| rs11187114 | 0.80[EUR][1000 genomes] |
| rs12220493 | 0.84[ASN][1000 genomes] |
| rs1573051 | 0.80[EUR][1000 genomes] |
| rs2421943 | 0.83[ASN][1000 genomes] |
| rs2798253 | 0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs3824735 | 0.81[EUR][1000 genomes] |
| rs7073833 | 0.86[ASN][1000 genomes] |
| rs7078418 | 0.82[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| IDE | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014