SNP Report

Basic Infomation

Name	rs11186843 dbSNP
Location	chr:10,93927646
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 89)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10786028	0.82[EUR][1000 genomes]
rs10882023	0.82[EUR][1000 genomes]
rs10882025	0.86[EUR][1000 genomes]
rs10882030	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10882031	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10882037	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10882038	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10882044	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186815	0.81[EUR][1000 genomes]
rs11186817	0.81[EUR][1000 genomes]
rs11186822	0.82[EUR][1000 genomes]
rs11186829	0.82[EUR][1000 genomes]
rs11186830	0.83[EUR][1000 genomes]
rs11186835	0.81[EUR][1000 genomes]
rs11186838	0.83[EUR][1000 genomes]
rs11186839	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186841	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186842	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11186852	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186856	0.93[EUR][1000 genomes]
rs11186859	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186860	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186866	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186867	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186868	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186870	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11186875	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186876	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11186878	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11186879	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11186880	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11186881	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11186884	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186888	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186892	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186894	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186895	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186896	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186897	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11186898	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12355759	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12357187	0.81[EUR][1000 genomes]
rs12358721	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12358765	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12359038	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12571139	0.83[EUR][1000 genomes]
rs1539468	0.82[EUR][1000 genomes]
rs1557178	0.82[EUR][1000 genomes]
rs1571176	0.83[EUR][1000 genomes]
rs17107517	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1878424	0.81[EUR][1000 genomes]
rs1935865	0.83[EUR][1000 genomes]
rs2096227	0.81[EUR][1000 genomes]
rs2105364	0.81[EUR][1000 genomes]
rs2185834	0.81[EUR][1000 genomes]
rs2421831	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421874	0.86[EUR][1000 genomes]
rs28661623	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34658839	0.82[EUR][1000 genomes]
rs3781230	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3781231	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4933717	0.82[EUR][1000 genomes]
rs56239008	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56345827	0.83[EUR][1000 genomes]
rs56705680	0.82[EUR][1000 genomes]
rs61875208	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61875210	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61875221	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6583802	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6583805	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs66636110	0.82[EUR][1000 genomes]
rs7067935	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7069149	0.82[EUR][1000 genomes]
rs7071524	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7073862	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7074059	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7079499	0.82[EUR][1000 genomes]
rs7084059	0.80[EUR][1000 genomes]
rs7085684	0.82[EUR][1000 genomes]
rs7086446	0.84[EUR][1000 genomes]
rs7088903	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7096357	0.82[EUR][1000 genomes]
rs72807264	0.94[ASN][1000 genomes]
rs746842	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs766398	0.83[EUR][1000 genomes]
rs766399	0.83[EUR][1000 genomes]
rs7905301	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9787608	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9794362	0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CPEB3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)