SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10431578	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs11177109	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11177162	0.85[EUR][1000 genomes]
rs11177169	0.85[EUR][1000 genomes]
rs11177179	0.85[EUR][1000 genomes]
rs11177184	0.85[EUR][1000 genomes]
rs11177260	0.83[EUR][1000 genomes]
rs11561483	0.83[EUR][1000 genomes]
rs11832449	0.85[EUR][1000 genomes]
rs11838212	0.83[EUR][1000 genomes]
rs12231675	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12231820	0.84[EUR][1000 genomes]
rs1463738	0.83[EUR][1000 genomes]
rs3751167	0.85[EUR][1000 genomes]
rs3751168	0.84[EUR][1000 genomes]
rs3751175	0.85[EUR][1000 genomes]
rs3829294	0.85[EUR][1000 genomes]
rs5002282	0.85[EUR][1000 genomes]
rs66485183	0.85[EUR][1000 genomes]
rs66518640	0.85[EUR][1000 genomes]
rs73116213	0.87[AFR][1000 genomes]
rs73116220	0.88[AFR][1000 genomes]
rs73117999	0.88[AFR][1000 genomes]
rs73119915	0.88[AFR][1000 genomes]
rs73269994	0.84[EUR][1000 genomes]
rs73271812	0.85[EUR][1000 genomes]
rs8181694	0.83[EUR][1000 genomes]
rs9668092	0.88[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MUC19	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)