SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12424585	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1390952	0.85[JPT][hapmap]
rs1540698	1.00[CEU][hapmap];0.81[CHB][hapmap];0.85[JPT][hapmap];0.86[EUR][1000 genomes]
rs2404350	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2896824	0.95[GIH][hapmap];0.90[TSI][hapmap]
rs481241	0.91[CEU][hapmap];0.84[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs57535237	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7308221	0.99[ASN][1000 genomes]
rs953824	0.92[GIH][hapmap];0.87[TSI][hapmap]

rSNP related genes

Symbol	Regulation type
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)