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rVarBase
SNP Report
Basic Infomation
Name
rs9929466  
dbSNP
Location
chr:16,23815768
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12446910
0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs168968
0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs168973
0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs194805
0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs194811
0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
PRKCB
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)