SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs4546483	0.80[TSI][hapmap]
rs4612156	0.80[TSI][hapmap]
rs6938256	0.95[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.98[TSI][hapmap]
rs6938755	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9350276	0.94[CHB][hapmap];0.82[JPT][hapmap]
rs9350296	0.91[YRI][hapmap]
rs9688952	0.94[CHB][hapmap];0.86[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)