SNP Report

Basic Infomation

Name	rs9348211 dbSNP
Location	chr:6,167375173
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 103)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1044059	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10455982	0.82[ASN][1000 genomes]
rs10484531	0.83[ASN][1000 genomes]
rs1060404	0.83[ASN][1000 genomes]
rs10946198	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10946199	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10946203	0.82[ASN][1000 genomes]
rs10946204	0.83[ASN][1000 genomes]
rs10946207	0.83[ASN][1000 genomes]
rs12212247	0.87[ASN][1000 genomes]
rs13192426	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13195812	0.82[ASN][1000 genomes]
rs1322077	0.83[ASN][1000 genomes]
rs1620933	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1743440	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1743441	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1794693	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1794694	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1794697	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1819333	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2013815	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2038580	0.83[ASN][1000 genomes]
rs2149083	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2149084	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2149085	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2149090	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2149091	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2149092	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2149093	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2237272	0.80[ASN][1000 genomes]
rs2237276	0.81[ASN][1000 genomes]
rs2247325	0.92[ASN][1000 genomes]
rs239934	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs239935	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2757042	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2757044	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2757046	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2757047	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2769345	0.83[AMR][1000 genomes]
rs2769346	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2769347	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2769348	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2769349	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs364283	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs364451	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs365189	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3752520	0.83[ASN][1000 genomes]
rs376097	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs376551	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs377232	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs385113	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs385863	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs386548	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs387733	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs388406	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs393727	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs397713	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs400063	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs400837	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs401260	0.82[EUR][1000 genomes]
rs402191	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs402749	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs405553	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs406095	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs408040	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs408087	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs408918	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs409356	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs415987	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs422694	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs424185	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs425039	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs427824	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs429083	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs430097	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs430145	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs430293	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs433191	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs434093	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs436625	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs447042	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs448060	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs453184	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4710147	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4710160	0.83[EUR][1000 genomes]
rs4710161	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4710171	0.83[ASN][1000 genomes]
rs5020533	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6904946	0.82[ASN][1000 genomes]
rs6923582	0.82[ASN][1000 genomes]
rs6929466	0.87[ASN][1000 genomes]
rs9295385	0.82[ASN][1000 genomes]
rs932644	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9457249	0.83[ASN][1000 genomes]
rs9457251	0.83[ASN][1000 genomes]
rs9457252	0.82[ASN][1000 genomes]
rs9457256	0.83[ASN][1000 genomes]
rs9457259	0.82[ASN][1000 genomes]
rs9459836	0.87[ASN][1000 genomes]
rs9459838	0.83[ASN][1000 genomes]
rs9459840	0.82[ASN][1000 genomes]
rs9459841	0.82[ASN][1000 genomes]
rs9459849	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RNASET2	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)