SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10424109	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11878850	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11882255	0.96[EUR][1000 genomes]
rs58344707	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7252897	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73923221	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8110715	0.92[EUR][1000 genomes]
rs923367	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs930230	0.97[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PDE4A	Proximal transcriptional regulation
ENSG00000267607	Distal transcriptional regulation
ICAM5	Distal transcriptional regulation
KEAP1	Distal transcriptional regulation
KRI1	Distal transcriptional regulation
ANGPTL6	Distal transcriptional regulation
CDC37	Distal transcriptional regulation
MIR1181	Distal transcriptional regulation
PDE4A	Distal transcriptional regulation
ENSG00000238364	Distal transcriptional regulation
ATG4D	Distal transcriptional regulation
MIR1238	Distal transcriptional regulation
PDE4A	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)