SNP Report
Basic Infomation
| Name | rs855706 dbSNP |
|---|---|
| Location | chr:10,93881119 |
| Allele | A/T |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10786029 | 0.82[ASN][1000 genomes] |
| rs1229578 | 0.85[ASN][1000 genomes] |
| rs1229579 | 0.83[ASN][1000 genomes] |
| rs1711849 | 0.83[ASN][1000 genomes] |
| rs2767654 | 0.81[ASN][1000 genomes] |
| rs701844 | 0.81[ASN][1000 genomes] |
| rs701846 | 0.86[ASN][1000 genomes] |
| rs7090737 | 0.82[ASN][1000 genomes] |
| rs7919840 | 0.80[ASN][1000 genomes] |
| rs855698 | 0.86[ASN][1000 genomes] |
| rs855699 | 0.86[ASN][1000 genomes] |
| rs855702 | 0.86[ASN][1000 genomes] |
| rs855703 | 0.86[ASN][1000 genomes] |
| rs855704 | 0.86[ASN][1000 genomes] |
| rs855707 | 0.86[ASN][1000 genomes] |
| rs855708 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs855710 | 0.86[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000214549 | Distal transcriptional regulation |
| CPEB3 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014