SNP Report
Basic Infomation
| Name | rs822484 dbSNP |
|---|---|
| Location | chr:1,155802354 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 20)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1627630 | 0.80[AFR][1000 genomes] |
| rs1749413 | 0.80[AFR][1000 genomes] |
| rs1749422 | 0.81[AFR][1000 genomes] |
| rs1756242 | 0.81[AFR][1000 genomes] |
| rs1886618 | 0.83[AFR][1000 genomes] |
| rs2485470 | 0.81[AFR][1000 genomes] |
| rs2885676 | 0.83[AFR][1000 genomes] |
| rs4581273 | 0.83[AFR][1000 genomes] |
| rs6427290 | 0.83[AFR][1000 genomes] |
| rs708613 | 0.81[AFR][1000 genomes] |
| rs822017 | 0.81[AFR][1000 genomes] |
| rs822021 | 0.81[AFR][1000 genomes] |
| rs822023 | 0.81[AFR][1000 genomes] |
| rs822479 | 0.83[AFR][1000 genomes] |
| rs822483 | 0.85[AFR][1000 genomes] |
| rs822487 | 0.81[AFR][1000 genomes] |
| rs822492 | 0.81[AFR][1000 genomes] |
| rs822496 | 0.83[AFR][1000 genomes] |
| rs822498 | 0.83[AFR][1000 genomes] |
| rs866603 | 0.81[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RIT1 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014