SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11079379	0.90[CHB][hapmap];0.80[CHD][hapmap]
rs12150440	0.83[JPT][hapmap];0.84[ASN][1000 genomes]
rs12600858	0.82[CEU][hapmap];0.90[CHB][hapmap];0.84[CHD][hapmap];0.86[TSI][hapmap]
rs59376051	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9896769	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9903442	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000202077	Distal transcriptional regulation
YPEL2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)