SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10160516	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12417294	0.95[EUR][1000 genomes]
rs12575518	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2073588	0.95[EUR][1000 genomes]
rs59432293	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7112078	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7112821	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7115285	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7115654	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7115826	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7937233	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7937242	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FTH1	Distal transcriptional regulation
ENSG00000269089	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)