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rVarBase
SNP Report
Basic Infomation
Name
rs7936573  
dbSNP
Location
chr:11,61302704
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10897167
0.88[GIH][hapmap];0.85[AMR][1000 genomes]
rs11230738
1.00[MEX][hapmap]
rs11230745
1.00[MEX][hapmap]
rs11820517
1.00[MEX][hapmap]
rs12282853
1.00[MEX][hapmap]
rs1791783
1.00[MEX][hapmap]
rs2908206
0.82[GIH][hapmap]
rs3018328
1.00[MEX][hapmap]
rs7948623
1.00[MEX][hapmap]
rSNP related genes
Symbol
Regulation type
SYT7
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
VPS37C
seeQTL