SNP Report

Basic Infomation

Name	rs7901434 dbSNP
Location	chr:10,93744473
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 39)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10430650	0.87[ASN][1000 genomes]
rs10509640	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10786024	0.89[ASN][1000 genomes]
rs10786025	0.91[ASN][1000 genomes]
rs10786026	0.91[ASN][1000 genomes]
rs10786027	0.84[ASN][1000 genomes]
rs11186744	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12253972	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12254369	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12259055	0.91[ASN][1000 genomes]
rs12262352	0.91[ASN][1000 genomes]
rs12263532	0.87[ASN][1000 genomes]
rs12263639	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12266974	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12267763	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12765070	0.90[ASN][1000 genomes]
rs17107211	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2048901	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2252200	0.91[ASN][1000 genomes]
rs2676806	0.88[ASN][1000 genomes]
rs2676821	0.91[ASN][1000 genomes]
rs2676823	0.91[ASN][1000 genomes]
rs2676824	0.89[ASN][1000 genomes]
rs2792019	0.91[ASN][1000 genomes]
rs4288679	0.87[ASN][1000 genomes]
rs4509678	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4642987	0.90[ASN][1000 genomes]
rs4933703	0.91[ASN][1000 genomes]
rs7070076	0.90[ASN][1000 genomes]
rs7071659	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7077506	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7904900	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7909870	0.91[ASN][1000 genomes]
rs7911552	0.91[ASN][1000 genomes]
rs7912721	0.91[ASN][1000 genomes]
rs7915659	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7924014	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs833368	0.91[ASN][1000 genomes]
rs833383	0.88[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
BTAF1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)