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rVarBase
SNP Report
Basic Infomation
Name
rs7718693  
dbSNP
Location
chr:5,130710562
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs17132326
1.00[AMR][1000 genomes]
rs2549012
0.88[YRI][hapmap]
rs73258141
1.00[AMR][1000 genomes]
rs73258164
1.00[AMR][1000 genomes]
rs73260144
1.00[AMR][1000 genomes]
rs7705623
1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
CDC42SE2
Distal transcriptional regulation
CDC42SE2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)