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rVarBase
SNP Report
Basic Infomation
Name
rs7600515  
dbSNP
Location
chr:2,61846841
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs13032237
0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2421333
1.00[CEU][hapmap];0.89[CHB][hapmap];0.90[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2901404
0.84[ASN][1000 genomes]
rs4535028
0.95[CHB][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs6545888
0.82[JPT][hapmap]
rs7355232
0.85[ASN][1000 genomes]
rs7355641
0.81[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
XPO1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)