SNP Report
Name | rs7593292   dbSNP |
---|---|
Location | chr:2,103296762 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1011781 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs1011782 | 1.00[ASW][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs13406732 | 1.00[AMR][1000 genomes] |
rs17027347 | 1.00[AMR][1000 genomes] |
rs17027648 | 1.00[AMR][1000 genomes] |
rs17027735 | 1.00[ASW][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17027747 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58584044 | 1.00[AMR][1000 genomes] |
rs58634634 | 1.00[AMR][1000 genomes] |
rs59734507 | 1.00[AMR][1000 genomes] |
rs6704840 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6705439 | 1.00[ASW][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6708290 | 1.00[AMR][1000 genomes] |
rs6708944 | 1.00[AMR][1000 genomes] |
rs6724541 | 1.00[AMR][1000 genomes] |
rs6725861 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6734539 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6735965 | 1.00[AMR][1000 genomes] |
rs6737329 | 1.00[AMR][1000 genomes] |
rs6738363 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6742280 | 1.00[AMR][1000 genomes] |
rs6752045 | 1.00[AMR][1000 genomes] |
rs73944360 | 1.00[AMR][1000 genomes] |
rs73944362 | 1.00[AMR][1000 genomes] |
rs73944375 | 1.00[AMR][1000 genomes] |
rs73944376 | 1.00[AMR][1000 genomes] |
rs7576925 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7595487 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
SLC9A2 | Proximal transcriptional regulation |
SLC9A2 | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
TTC31 | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014