SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11260568	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12069094	1.00[EUR][1000 genomes]
rs12073801	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3753340	0.91[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57834430	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6662635	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72894077	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7547316	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7547329	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
UBE2J2	Proximal transcriptional regulation
SCNN1D	Proximal transcriptional regulation
UBE2J2	Distal transcriptional regulation
ENSG00000230415	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)