SNP Report
| Name | rs7358642   dbSNP |
|---|---|
| Location | chr:12,48358716 |
| Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10161320 | 1.00[AMR][1000 genomes] |
| rs11168329 | 0.84[AFR][1000 genomes] |
| rs11168384 | 1.00[AMR][1000 genomes] |
| rs11168385 | 1.00[AMR][1000 genomes] |
| rs11168405 | 1.00[AMR][1000 genomes] |
| rs11574030 | 1.00[AMR][1000 genomes] |
| rs12303042 | 1.00[AMR][1000 genomes] |
| rs12303151 | 1.00[AMR][1000 genomes] |
| rs12303317 | 1.00[AMR][1000 genomes] |
| rs12303908 | 1.00[AMR][1000 genomes] |
| rs12304251 | 1.00[AMR][1000 genomes] |
| rs12306869 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12310743 | 1.00[AMR][1000 genomes] |
| rs12322803 | 1.00[AMR][1000 genomes] |
| rs17122326 | 1.00[CHB][hapmap] |
| rs73301128 | 1.00[AMR][1000 genomes] |
| rs73301161 | 1.00[AMR][1000 genomes] |
| rs73301164 | 1.00[AMR][1000 genomes] |
| rs9630296 | 1.00[CHB][hapmap] |
| Symbol | Regulation type |
|---|---|
| TMEM106C | Proximal transcriptional regulation |
| RPAP3 | Distal transcriptional regulation |
| ENSG00000257433 | Distal transcriptional regulation |
| ASB8 | Distal transcriptional regulation |
| VDR | Distal transcriptional regulation |
| TMEM106C | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

| eQTL related gene | Source |
|---|---|
| QRFP | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014



