SNP Report
Name | rs7358642   dbSNP |
---|---|
Location | chr:12,48358716 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10161320 | 1.00[AMR][1000 genomes] |
rs11168329 | 0.84[AFR][1000 genomes] |
rs11168384 | 1.00[AMR][1000 genomes] |
rs11168385 | 1.00[AMR][1000 genomes] |
rs11168405 | 1.00[AMR][1000 genomes] |
rs11574030 | 1.00[AMR][1000 genomes] |
rs12303042 | 1.00[AMR][1000 genomes] |
rs12303151 | 1.00[AMR][1000 genomes] |
rs12303317 | 1.00[AMR][1000 genomes] |
rs12303908 | 1.00[AMR][1000 genomes] |
rs12304251 | 1.00[AMR][1000 genomes] |
rs12306869 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12310743 | 1.00[AMR][1000 genomes] |
rs12322803 | 1.00[AMR][1000 genomes] |
rs17122326 | 1.00[CHB][hapmap] |
rs73301128 | 1.00[AMR][1000 genomes] |
rs73301161 | 1.00[AMR][1000 genomes] |
rs73301164 | 1.00[AMR][1000 genomes] |
rs9630296 | 1.00[CHB][hapmap] |
Symbol | Regulation type |
---|---|
TMEM106C | Proximal transcriptional regulation |
RPAP3 | Distal transcriptional regulation |
ENSG00000257433 | Distal transcriptional regulation |
ASB8 | Distal transcriptional regulation |
VDR | Distal transcriptional regulation |
TMEM106C | RNA binding protein mediated regulation |
Proximal transcriptional regulation
![](images/add.gif)
Distal transcriptional regulation
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Post-transcriptional regulation:within mature miRNA
![](images/add.gif)
Post-transcriptional regulation: associated with RNA binding protein
![](images/add.gif)
eQTL related gene | Source |
---|---|
QRFP | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014