SNP Report
| Name | rs73306272   dbSNP |
|---|---|
| Location | chr:20,44523134 |
| Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs2144180 | 0.84[AFR][1000 genomes] |
| rs35492126 | 0.84[AFR][1000 genomes] |
| rs35928298 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6032580 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7272593 | 0.84[AFR][1000 genomes] |
| rs73291280 | 1.00[AMR][1000 genomes] |
| rs73293211 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73293215 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73306409 | 0.87[AFR][1000 genomes] |
| rs73306424 | 0.84[AFR][1000 genomes] |
| rs73306432 | 0.84[AFR][1000 genomes] |
| rs73306445 | 0.84[AFR][1000 genomes] |
| rs73306449 | 0.84[AFR][1000 genomes] |
| rs73306452 | 0.84[AFR][1000 genomes] |
| rs73306471 | 0.84[AFR][1000 genomes] |
| rs73306476 | 0.84[AFR][1000 genomes] |
| rs73306480 | 0.84[AFR][1000 genomes] |
| rs73306481 | 0.91[AFR][1000 genomes] |
| rs73306483 | 0.84[AFR][1000 genomes] |
| rs73306486 | 0.84[AFR][1000 genomes] |
| rs73308350 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73308406 | 0.84[AFR][1000 genomes] |
| rs73308414 | 0.92[AFR][1000 genomes] |
| rs8122973 | 0.84[AFR][1000 genomes] |
| rs8123134 | 0.84[AFR][1000 genomes] |
| rs8123196 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| CTSA | Proximal transcriptional regulation |
| NEURL2 | Proximal transcriptional regulation |
| PCIF1 | Distal transcriptional regulation |
| PLTP | Distal transcriptional regulation |
| CTSA | Distal transcriptional regulation |
| CTSA | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




