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rVarBase
SNP Report
Basic Infomation
Name
rs73233650  
dbSNP
Location
chr:20,30130932
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11905025
0.85[AFR][1000 genomes]
rs11905632
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2376865
0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73232401
1.00[AMR][1000 genomes]
rs73233631
0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73233662
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73235750
0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8126000
0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9712389
0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
HM13
Proximal transcriptional regulation
ENSG00000101898
Proximal transcriptional regulation
HM13
Distal transcriptional regulation
ENSG00000101898
Distal transcriptional regulation
ID1
Distal transcriptional regulation
MIR3193
Distal transcriptional regulation
HM13
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)