SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1793934	1.00[JPT][hapmap]
rs4516035	0.82[ASW][hapmap];0.96[GIH][hapmap];0.88[MEX][hapmap];1.00[YRI][hapmap]
rs4760671	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7139166	1.00[YRI][hapmap]
rs7296550	0.83[EUR][1000 genomes]
rs7310552	0.82[ASW][hapmap];0.93[GIH][hapmap];0.82[MEX][hapmap];1.00[YRI][hapmap]
rs7970314	1.00[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
VDR	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 4)