SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231647	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11231654	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12272430	0.82[ASW][hapmap];0.93[LWK][hapmap];0.81[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12273949	0.82[ASW][hapmap];0.93[LWK][hapmap];0.81[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12274687	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12276514	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12284007	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12284291	0.93[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12285082	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12294590	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7936540	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
C11orf84	Distal transcriptional regulation
COX8A	Distal transcriptional regulation
ENSG00000256100	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 1)