SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231647	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11231654	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12272430	1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12273949	1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12274687	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12276514	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12284007	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12284291	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12294590	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7103036	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7936540	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
COX8A	Proximal transcriptional regulation
ENSG00000256100	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)