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rVarBase
SNP Report
Basic Infomation
Name
rs7100689  
dbSNP
Location
chr:10,82222178
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1993484
0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2343306
0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4934169
1.00[ASN][1000 genomes]
rs7086627
0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7098414
0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TSPAN14
Distal transcriptional regulation
TSPAN14
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)