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rVarBase
SNP Report
Basic Infomation
Name
rs7081756  
dbSNP
Location
chr:10,82044920
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10736365
1.00[CHB][hapmap]
rs1985908
0.89[CHD][hapmap];0.83[TSI][hapmap];0.85[EUR][1000 genomes]
rs9787439
1.00[CHB][hapmap]
rSNP related genes
Symbol
Regulation type
MAT1A
Distal transcriptional regulation
MAT1A
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 4)
eQTL related gene
Source
ANXA11
SCAN
LRIT1
SCAN
DYDC2
SCAN
ANXA11
SCAN