SNP Report
Basic Infomation
| Name | rs7070197 dbSNP |
|---|---|
| Location | chr:10,81695735 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 22)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1054053 | 0.84[AMR][1000 genomes] |
| rs1923538 | 0.90[AMR][1000 genomes] |
| rs1923540 | 0.90[AMR][1000 genomes] |
| rs2243639 | 0.91[AMR][1000 genomes] |
| rs2246111 | 0.90[AMR][1000 genomes] |
| rs2256574 | 0.87[AMR][1000 genomes] |
| rs2258874 | 0.83[AMR][1000 genomes] |
| rs2758545 | 0.91[AMR][1000 genomes] |
| rs2758547 | 0.90[AMR][1000 genomes];0.80[EUR][1000 genomes] |
| rs2758550 | 0.90[AMR][1000 genomes] |
| rs2758555 | 0.90[AMR][1000 genomes] |
| rs2758556 | 0.90[AMR][1000 genomes] |
| rs2758558 | 0.84[AMR][1000 genomes] |
| rs2819097 | 0.92[AMR][1000 genomes] |
| rs2819098 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs2819099 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs2819100 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs2819101 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs2819102 | 0.87[AMR][1000 genomes] |
| rs2819104 | 0.89[AMR][1000 genomes] |
| rs2819106 | 0.87[AMR][1000 genomes] |
| rs7905105 | 0.90[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MBL1P | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014