SNP Report
Basic Infomation
| Name | rs7014560 dbSNP |
|---|---|
| Location | chr:8,130568209 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10956482 | 0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs12548063 | 0.80[EUR][1000 genomes] |
| rs1594774 | 0.80[EUR][1000 genomes] |
| rs16904119 | 0.80[EUR][1000 genomes] |
| rs2043404 | 0.81[EUR][1000 genomes] |
| rs4319050 | 0.80[EUR][1000 genomes] |
| rs61453473 | 0.80[EUR][1000 genomes] |
| rs6470739 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs6982553 | 0.80[EUR][1000 genomes] |
| rs7000320 | 0.80[EUR][1000 genomes] |
| rs7006214 | 0.80[EUR][1000 genomes] |
| rs72609887 | 0.82[EUR][1000 genomes] |
| rs7829245 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs7840067 | 0.81[EUR][1000 genomes] |
| rs7846327 | 0.80[EUR][1000 genomes] |
| rs892350 | 0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs892351 | 0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs9642890 | 0.81[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CCDC26 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014