SNP Report
Basic Infomation
| Name | rs695061 dbSNP |
|---|---|
| Location | chr:12,50262222 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs2603102 | 1.00[AMR][1000 genomes] |
| rs2603103 | 1.00[AMR][1000 genomes] |
| rs2603117 | 1.00[AMR][1000 genomes] |
| rs2720299 | 1.00[AMR][1000 genomes] |
| rs297919 | 0.82[AFR][1000 genomes] |
| rs297920 | 0.82[AFR][1000 genomes] |
| rs297921 | 0.82[AFR][1000 genomes] |
| rs297925 | 0.87[AFR][1000 genomes] |
| rs297927 | 0.82[AFR][1000 genomes] |
| rs297928 | 0.82[AFR][1000 genomes] |
| rs297930 | 0.82[AFR][1000 genomes] |
| rs4439592 | 1.00[AMR][1000 genomes] |
| rs584830 | 0.82[AFR][1000 genomes] |
| rs585255 | 0.82[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| FAIM2 | Proximal transcriptional regulation |
| BCDIN3D | Distal transcriptional regulation |
| ENSG00000242041 | Distal transcriptional regulation |
| AQP6 | Distal transcriptional regulation |
| ASIC1 | Distal transcriptional regulation |
| AQP5 | Distal transcriptional regulation |
| ENSG00000257588 | Distal transcriptional regulation |
| FAIM2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014