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rVarBase
SNP Report
Basic Infomation
Name
rs6887731  
dbSNP
Location
chr:5,131863600
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11739623
0.98[EUR][1000 genomes]
rs4705959
0.98[EUR][1000 genomes]
rs57896917
0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72797327
1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
IL5
Distal transcriptional regulation
RAD50
Distal transcriptional regulation
SEPT8
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)