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rVarBase
SNP Report
Basic Infomation
Name
rs6861343  
dbSNP
Location
chr:5,131251202
Allele
C/T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs17211907
1.00[EUR][1000 genomes]
rs2069633
1.00[MEX][hapmap]
rs2069801
1.00[EUR][1000 genomes]
rs6596046
1.00[EUR][1000 genomes]
rs6872876
1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6892728
1.00[EUR][1000 genomes]
rs743677
1.00[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000239642
RNA binding protein mediated regulation
ACSL6
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)