SNP Report

Basic Infomation

Name	rs6751977 dbSNP
Location	chr:2,102967430
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 50)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10170583	0.84[ASN][1000 genomes]
rs10173193	0.84[ASN][1000 genomes]
rs10176664	0.84[ASN][1000 genomes]
rs10192036	0.81[YRI][hapmap];0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10192157	0.81[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10204137	0.81[YRI][hapmap];0.93[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10204837	0.84[ASN][1000 genomes]
rs10206753	0.81[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10208293	0.97[ASN][1000 genomes]
rs11123925	0.84[ASN][1000 genomes]
rs11688559	0.87[ASN][1000 genomes]
rs11688568	0.87[ASN][1000 genomes]
rs11688573	0.87[ASN][1000 genomes]
rs11689730	0.87[ASN][1000 genomes]
rs11695627	0.87[ASN][1000 genomes]
rs13392100	0.84[ASN][1000 genomes]
rs13424006	0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1362348	0.84[ASN][1000 genomes]
rs1420099	0.84[ASN][1000 genomes]
rs1861245	0.82[YRI][hapmap]
rs1974675	0.84[ASN][1000 genomes]
rs3755276	0.84[ASN][1000 genomes]
rs3771166	0.84[ASN][1000 genomes]
rs4311080	0.83[ASN][1000 genomes]
rs4485584	0.83[ASN][1000 genomes]
rs4485585	0.85[ASN][1000 genomes]
rs4488681	0.81[ASN][1000 genomes]
rs4851565	0.84[ASN][1000 genomes]
rs4851566	0.84[ASN][1000 genomes]
rs4988955	0.81[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4988956	0.81[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4988957	0.81[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4988958	0.81[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5010059	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6543123	0.84[ASN][1000 genomes]
rs6704565	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67088699	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6734742	1.00[YRI][hapmap];0.99[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6749114	0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6751967	0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6752482	1.00[YRI][hapmap];0.99[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72823661	0.95[ASN][1000 genomes]
rs72823663	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7558339	0.84[ASN][1000 genomes]
rs7603730	0.84[ASN][1000 genomes]
rs7608638	0.87[ASN][1000 genomes]
rs9308857	0.84[ASN][1000 genomes]
rs9807962	0.84[ASN][1000 genomes]
rs9807989	0.83[ASN][1000 genomes]
rs9808453	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL18R1	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)