SNP Report
Basic Infomation
| Name | rs67406033 dbSNP |
|---|---|
| Location | chr:10,35283453 |
| Allele | C/A |
LD-proxy of rSNPs(r2>0.8) (count: 25)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11591574 | 0.87[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs11592064 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs11595640 | 0.81[AFR][1000 genomes] |
| rs11596128 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs11597912 | 0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs11597913 | 0.81[AFR][1000 genomes] |
| rs11598988 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs11599196 | 0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12767102 | 0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12767868 | 0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12773146 | 0.81[AMR][1000 genomes] |
| rs12775079 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12777222 | 0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12778629 | 0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs12782377 | 0.81[AFR][1000 genomes] |
| rs2384285 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs34658029 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs35356037 | 0.87[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs35807819 | 0.87[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs56919928 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs59621927 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs60648958 | 0.87[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs61161332 | 0.87[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs72789685 | 0.81[EUR][1000 genomes] |
| rs72789691 | 0.87[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CREM | Distal transcriptional regulation |
| ENSG00000230534 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014